Our Examples
Generation for Antibody Engineering
Comprehensive antibody engineering workflow using BioLM.ai models. Learn variant binder design methods, including machine learning-based can...
Introduction
Introduction to the BioLM.ai API and programmatic access to the platform.
ESMFold API
Protein 3D structure prediction. Predict PDBs directly from a protein sequence.
ESMFold PDB Generation
Advanced tutorial for generating PDB files using ESMFold with detailed examples.
ESM2 API
SOTA general-purpose protein language model. Can be used to predict structure, function and other protein properties directly from individua...
Protein Attention Maps with ESM-2
Learn how to extract and visualize protein attention maps using ESM-2 models for understanding protein structure and function.
Predict Protein Contact Maps with ESM-2
Use ESM-2 models to predict protein contact maps for understanding protein structure and interactions.
ESM2 Embeddings with XGBoost
Learn how to use ESM2 protein embeddings with XGBoost for downstream machine learning tasks.
ESM-1v API
Language model specialized for prediction of variant effects. Enables SOTA zero-shot prediction of the functional effects of sequence variat...
ESM-1v Deep Mutational Scan
Perform deep mutational scanning of proteins using ESM-1v to predict the effects of all possible single amino acid substitutions.
ESM-IF1 (Inverse Fold) API
Inverse folding model. Can be used to design sequences for given structures, enabling rational protein design.
ProteInfer API
ProteInfer uses convolutional neural networks for direct prediction of protein functions from amino acid sequences.
ProGen2 API
ProGen2, with models up to 6.4B parameters, is adept at generating viable protein sequences and predicting their fitness. It's utilized in p...
GPT2 Directed Antibody Generation
Generate antibody sequences using GPT2 models specifically trained for directed antibody design and optimization.
BioLMTox API
Enhance biosecurity with the BioLMTox classification endpoint for detecting and analyzing toxin sequences.
BioLMTox Toxin Similarity
Enhance biosecurity predictions with the BioLMTox embedding endpoint for analyzing toxin sequence similarities.
Intrinsic Scoring for Antibody Engineering
Use intrinsic scoring methods to evaluate and optimize antibody sequences for improved binding and therapeutic properties.
Structural Scoring for Antibody Engineering
Apply structural scoring techniques to enhance antibody design by evaluating structural properties and stability.
Screen 1,000 Peptides Before Lunch
Launch a peptide screening campaign by defining a multi-stage pipeline, predicting stability and solubility in parallel, and narrowing your...
Skip Repeated API Calls: Cache and Reuse Predictions Across Screening Runs
Store predictions permanently to easily re-filter, re-rank, or adjust thresholds across campaigns, ensuring seamless pipeline resumption aft...
Select a Diverse Peptide Library by Clustering ESM2 Embeddings
Cluster your sequence library using ESM2 embeddings, select diverse representatives, and visualize sequence space to optimize your screening...
Run a Screening Campaign Across Multiple Batches Without Repeating Predictions
Effortlessly integrate new sequences into your design pipeline while leveraging cached predictions, optimizing efficiency, and tracking camp...
Scan All Single-Point Variants for Thermal Stability and Solubility
Generate a comprehensive single-residue mutant library, predict stability and solubility, and visualize the mutational landscape for informe...
Explore Protein Sequence Space: Similarity, Outliers, and Property Landscapes
Explore peptide libraries by finding similar sequences, identifying outliers, and visualizing property landscapes to enhance your research i...
Filter Designs by Fold Quality Before Running Stability and Solubility Predictions
Filter your designed library by stability and solubility before investing in structural predictions, ensuring efficient use of resources for...
Downstream For Antibody Engineering
Design and optimize antibodies through a complete workflow, leveraging BioLM.ai models to enhance specificity and efficacy in therapeutic ap...
Accelerate yourLead generation
BioLM offers tailored AI solutions to meet your experimental needs. We deliver top-tier results with our model-agnostic approach, powered by our highly scalable and real-time GPU-backed APIs and years of experience in biological data modeling, all at a competitive price.
